STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTF1APancreas associated transcription factor 1a. (274 aa)    
Predicted Functional Partners:
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.715
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.715
FOXN4
Forkhead box N4.
   
 
 0.568
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
  
 0.568
VSX1
Visual system homeobox 1.
   
  
 0.566
PDX1
Homeobox domain-containing protein.
   
 
 0.535
FAP
Fibroblast activation protein alpha; Belongs to the peptidase S9B family.
   
  
 0.506
TCF12
Transcription factor 12.
   
 0.470
ENSTGUP00000026807
Vitellogenin-2.
   
 0.470
TCF3
Transcription factor 3.
   
 0.470
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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