STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGR6Leucine rich repeat containing G protein-coupled receptor 6. (930 aa)    
Predicted Functional Partners:
RSPO1
R-spondin 1.
    
 0.739
FSHB
Follicle stimulating hormone subunit beta.
   
 0.692
TSHB
Thyroid stimulating hormone subunit beta.
    
 0.614
RSPO4
R-spondin 4.
    
 0.614
LRR1
Leucine rich repeat protein 1.
  
 0.567
ZNRF3
RING-type domain-containing protein.
    
 0.512
ENSTGUP00000010477
annotation not available
   
 
 0.498
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.487
SYT16
Synaptotagmin 16.
      
 0.482
OSTF1
Osteoclast stimulating factor 1.
      
 0.480
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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