STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB1Uncharacterized protein. (1295 aa)    
Predicted Functional Partners:
ABCB5
Uncharacterized protein.
  
  
 
0.902
OPRM1
Opioid receptor mu 1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.684
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.540
ABCB7
ATP binding cassette subfamily B member 7.
    
0.492
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
     
 0.459
UBE2V1-2
Ubiquitin conjugating enzyme E2 V1.
     
 0.442
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.442
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
    
0.433
ACACB
Acetyl-CoA carboxylase beta.
   
 
 0.430
ACACA
Acetyl-CoA carboxylase alpha.
   
 
 0.430
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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