STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX58DExD/H-box helicase 58. (958 aa)    
Predicted Functional Partners:
MAVS
CARD_2 domain-containing protein.
    
 0.999
DHX58
DExH-box helicase 58.
   
0.985
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.972
ATG12
Autophagy related 12.
    
 0.971
TRIM25
Tripartite motif containing 25.
   
 0.964
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.941
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.941
LOC115494026
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.
    
 0.941
EIF2AK2
Eukaryotic translation initiation factor 2 alpha kinase 2.
   
 0.915
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.910
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.