STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22BTBC1 domain family member 22B. (649 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.674
TBC1D10A
Rab-GAP TBC domain-containing protein.
      
 0.533
MRPL21
Mitochondrial ribosomal protein L21.
    
 
 0.511
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.510
TBC1D20
TBC1 domain family member 20.
   
 
 0.505
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.502
MRPS35
MRP-S28 domain-containing protein.
    
   0.499
TBC1D7
Rab-GAP TBC domain-containing protein.
      
 0.487
EVI5
Ecotropic viral integration site 5.
      
 0.487
MON2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
      
 0.483
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.