STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAP9THAP domain containing 9. (872 aa)    
Predicted Functional Partners:
PGBD5
PiggyBac transposable element derived 5.
    
 
 0.654
GIN1
Gypsy retrotransposon integrase 1.
    
 0.593
MPHOSPH6
M-phase phosphoprotein 6.
      
 0.577
EFCAB2
EF-hand calcium binding domain 2.
    
 0.557
HARBI1
Harbinger transposase derived 1.
      
 0.489
H3F3A
Histone H3; Belongs to the histone H3 family.
    
 0.465
LOC100217646
Histone H3; Belongs to the histone H3 family.
    
 0.465
LOC100217646-2
Histone H3.
    
 0.465
LOC100222344
Uncharacterized protein.
   
 0.444
MRPS2
Mitochondrial ribosomal protein S2.
   
 0.424
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.