STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC45Leucine rich repeat containing 45. (750 aa)    
Predicted Functional Partners:
ENSTGUP00000036780
annotation not available
   
  
 0.662
ENSTGUP00000038112
annotation not available
      
 0.636
WDR37
WD_REPEATS_REGION domain-containing protein.
      
 0.577
ARMC8
Armadillo repeat containing 8.
      
 0.566
SCLT1
Sodium channel and clathrin linker 1.
    
 
 0.560
CEP135
Uncharacterized protein.
      
 0.550
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
    0.543
CEP89
Centrosomal protein 89.
     
 0.543
PHACTR1
Phosphatase and actin regulator.
      
 0.540
KIF2A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.475
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.