STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100225100Unc-51 like kinase 3. (468 aa)    
Predicted Functional Partners:
SUFU
Suppressor of fused homolog.
   
 
 0.896
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.863
BECN1
Uncharacterized protein.
    
 0.847
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.845
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.843
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.828
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.746
ATG14
Uncharacterized protein.
    
 0.737
ATG2B
Uncharacterized protein.
   
 
 0.734
ATG16L1
Autophagy related 16 like 1.
    
 
 0.730
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.