LAMC2 protein (Taeniopygia guttata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LAMC2

Uncharacterized protein. (1065 aa)

Predicted Functional Partners:

H0Z0P2_TAEGU

0.904

LAMA4

0.865

LAMB2

0.845

ENSTGUP00000001549

0.832

H0YTD6_TAEGU

0.832

H0ZXW0_TAEGU

0.817

LAMB1

0.814

LAMA2

0.809

LAMA5

0.763

LAMA3

0.763

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTGUP00000001549	H0Z0P2_TAEGU	ENSTGUP00000001549	ENSTGUP00000004129	annotation not available	Uncharacterized protein.	0.600
ENSTGUP00000001549	H0ZXW0_TAEGU	ENSTGUP00000001549	ENSTGUP00000036183	annotation not available	Uncharacterized protein.	0.631
ENSTGUP00000001549	LAMA2	ENSTGUP00000001549	ENSTGUP00000019486	annotation not available	Uncharacterized protein.	0.594
ENSTGUP00000001549	LAMA3	ENSTGUP00000001549	ENSTGUP00000010839	annotation not available	Uncharacterized protein.	0.635
ENSTGUP00000001549	LAMA4	ENSTGUP00000001549	ENSTGUP00000012350	annotation not available	Laminin subunit alpha 4.	0.744
ENSTGUP00000001549	LAMA5	ENSTGUP00000001549	ENSTGUP00000008041	annotation not available	Uncharacterized protein.	0.631
ENSTGUP00000001549	LAMC2	ENSTGUP00000001549	ENSTGUP00000004091	annotation not available	Uncharacterized protein.	0.832
H0YTD6_TAEGU	H0Z0P2_TAEGU	ENSTGUP00000026106	ENSTGUP00000004129	Uncharacterized protein.	Uncharacterized protein.	0.600
H0YTD6_TAEGU	H0ZXW0_TAEGU	ENSTGUP00000026106	ENSTGUP00000036183	Uncharacterized protein.	Uncharacterized protein.	0.631
H0YTD6_TAEGU	LAMA2	ENSTGUP00000026106	ENSTGUP00000019486	Uncharacterized protein.	Uncharacterized protein.	0.594
H0YTD6_TAEGU	LAMA3	ENSTGUP00000026106	ENSTGUP00000010839	Uncharacterized protein.	Uncharacterized protein.	0.631
H0YTD6_TAEGU	LAMA4	ENSTGUP00000026106	ENSTGUP00000012350	Uncharacterized protein.	Laminin subunit alpha 4.	0.744
H0YTD6_TAEGU	LAMA5	ENSTGUP00000026106	ENSTGUP00000008041	Uncharacterized protein.	Uncharacterized protein.	0.631
H0YTD6_TAEGU	LAMC2	ENSTGUP00000026106	ENSTGUP00000004091	Uncharacterized protein.	Uncharacterized protein.	0.832
H0Z0P2_TAEGU	ENSTGUP00000001549	ENSTGUP00000004129	ENSTGUP00000001549	Uncharacterized protein.	annotation not available	0.600
H0Z0P2_TAEGU	H0YTD6_TAEGU	ENSTGUP00000004129	ENSTGUP00000026106	Uncharacterized protein.	Uncharacterized protein.	0.600
H0Z0P2_TAEGU	H0ZXW0_TAEGU	ENSTGUP00000004129	ENSTGUP00000036183	Uncharacterized protein.	Uncharacterized protein.	0.664
H0Z0P2_TAEGU	LAMA2	ENSTGUP00000004129	ENSTGUP00000019486	Uncharacterized protein.	Uncharacterized protein.	0.794
H0Z0P2_TAEGU	LAMA3	ENSTGUP00000004129	ENSTGUP00000010839	Uncharacterized protein.	Uncharacterized protein.	0.664
H0Z0P2_TAEGU	LAMA4	ENSTGUP00000004129	ENSTGUP00000012350	Uncharacterized protein.	Laminin subunit alpha 4.	0.724