RBM8A protein (Taeniopygia guttata) - STRING interaction network

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RBM8A

RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (199 aa)

Predicted Functional Partners:

EIF4A3

0.999

MAGOH

0.999

CASC3

0.999

UPF2

0.993

RNPS1

0.990

UPF1

0.989

SRSF1

0.983

SMG7

0.968

SMG1

0.963

UPF3B

0.951

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASC3	EIF4A3	ENSTGUP00000038555	ENSTGUP00000002204	CASC3 exon junction complex subunit.	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	0.999
CASC3	MAGOH	ENSTGUP00000038555	ENSTGUP00000009498	CASC3 exon junction complex subunit.	Uncharacterized protein.	0.988
CASC3	RBM8A	ENSTGUP00000038555	ENSTGUP00000004588	CASC3 exon junction complex subunit.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
CASC3	RNPS1	ENSTGUP00000038555	ENSTGUP00000024519	CASC3 exon junction complex subunit.	RNA binding protein with serine rich domain 1.	0.827
CASC3	SMG1	ENSTGUP00000038555	ENSTGUP00000009755	CASC3 exon junction complex subunit.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.485
CASC3	SMG7	ENSTGUP00000038555	ENSTGUP00000024661	CASC3 exon junction complex subunit.	SMG7 nonsense mediated mRNA decay factor.	0.559
CASC3	SRSF1	ENSTGUP00000038555	ENSTGUP00000028385	CASC3 exon junction complex subunit.	RRM domain-containing protein.	0.603
CASC3	UPF1	ENSTGUP00000038555	ENSTGUP00000001084	CASC3 exon junction complex subunit.	UPF1 RNA helicase and ATPase.	0.990
CASC3	UPF2	ENSTGUP00000038555	ENSTGUP00000029652	CASC3 exon junction complex subunit.	UPF2 regulator of nonsense mediated mRNA decay.	0.886
CASC3	UPF3B	ENSTGUP00000038555	ENSTGUP00000003529	CASC3 exon junction complex subunit.	UPF3B regulator of nonsense mediated mRNA decay.	0.937
EIF4A3	CASC3	ENSTGUP00000002204	ENSTGUP00000038555	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	CASC3 exon junction complex subunit.	0.999
EIF4A3	MAGOH	ENSTGUP00000002204	ENSTGUP00000009498	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	Uncharacterized protein.	0.998
EIF4A3	RBM8A	ENSTGUP00000002204	ENSTGUP00000004588	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
EIF4A3	RNPS1	ENSTGUP00000002204	ENSTGUP00000024519	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	RNA binding protein with serine rich domain 1.	0.995
EIF4A3	SMG1	ENSTGUP00000002204	ENSTGUP00000009755	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.974
EIF4A3	SMG7	ENSTGUP00000002204	ENSTGUP00000024661	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	SMG7 nonsense mediated mRNA decay factor.	0.569
EIF4A3	SRSF1	ENSTGUP00000002204	ENSTGUP00000028385	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	RRM domain-containing protein.	0.983
EIF4A3	UPF1	ENSTGUP00000002204	ENSTGUP00000001084	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	UPF1 RNA helicase and ATPase.	0.936
EIF4A3	UPF2	ENSTGUP00000002204	ENSTGUP00000029652	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	UPF2 regulator of nonsense mediated mRNA decay.	0.911
EIF4A3	UPF3B	ENSTGUP00000002204	ENSTGUP00000003529	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	UPF3B regulator of nonsense mediated mRNA decay.	0.956