STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC34Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
RIBC2
RIB43A domain with coiled-coils 2.
   
 0.585
DEPDC1B
DEP domain containing 1B.
   
  
 0.564
GSTCD
Glutathione S-transferase C-terminal domain containing.
    
 
 0.564
NEMP1
Uncharacterized protein.
      
 0.559
CCDC77
Coiled-coil domain containing 77.
   
  
 0.556
CEP85
Centrosomal protein 85.
     
 0.538
LOC100225836
Rho-GAP domain-containing protein.
   
 
 0.515
ZNF367
Zinc finger protein 367.
   
 0.509
METTL9
Methyltransferase like 9.
      
 0.438
NUDT3
Nudix hydrolase 3.
      
 0.430
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.