STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACM1LSAC domain-containing protein. (662 aa)    
Predicted Functional Partners:
INPP5E
Inositol polyphosphate-5-phosphatase E.
 
  
 0.991
INPP5B
Rho-GAP domain-containing protein.
 
  
 0.984
PI4KA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.972
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.948
OCRL
OCRL inositol polyphosphate-5-phosphatase.
 
  
 0.937
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
    
 0.931
PI4K2B
Phosphatidylinositol 4-kinase type 2 beta.
     
 0.927
PI4K2A
PI3K/PI4K domain-containing protein.
     
 0.927
SYNJ2
Synaptojanin 2.
    
0.927
SYNJ1
Synaptojanin 1.
    
0.927
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.