STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100189947Anti_prolifrtn domain-containing protein. (155 aa)    
Predicted Functional Partners:
CNOT8
Uncharacterized protein.
    
 0.689
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.689
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.617
CNOT11
Uncharacterized protein.
    
 0.617
CNOT10
Uncharacterized protein.
    
 0.602
CNOT2
CCR4-NOT transcription complex subunit 2.
    
  0.566
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.531
ENSTGUP00000026987
annotation not available
    
 0.496
ENSTGUP00000035941
annotation not available
    
 0.496
CNOT4
CCR4-NOT transcription complex subunit 4.
     
 0.448
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.