STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105760438Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.938
SNAP29
t-SNARE coiled-coil homology domain-containing protein.
    
 0.887
ANKRD27
Ankyrin repeat domain 27.
    
 0.824
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.822
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.817
STX12
Syntaxin 12; Belongs to the syntaxin family.
   
 0.806
AGFG1
ArfGAP with FG repeats 1.
    
 0.768
STX17
Syntaxin 17; Belongs to the syntaxin family.
   
 0.737
SNAP47
Synaptosome associated protein 47.
    
 0.728
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.728
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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