STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPLD1Zn_dep_PLPC domain-containing protein. (834 aa)    
Predicted Functional Partners:
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
     
 0.918
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.601
ENSTGUP00000028843
annotation not available
   
 0.501
CRTAC1
Cartilage acidic protein 1.
      
 0.497
ALDH5A1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.493
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.474
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.474
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.474
ITGB4
Integrin beta.
   
 0.474
ITGBL1
Integrin subunit beta like 1.
   
 0.474
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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