STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100219376WD_REPEATS_REGION domain-containing protein. (810 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
 0.995
WDR3
WD repeat domain 3.
  
0.993
UTP18
UTP18 small subunit processome component.
   
 0.991
UTP4
UTP4 small subunit processome component.
   
 0.991
HEATR1
HEAT repeat containing 1.
   
 0.988
UTP6
UTP6 small subunit processome component.
   
 0.986
UTP15
UTP15 small subunit processome component.
  
0.985
NOL6
Nucleolar protein 6.
   
 0.983
WDR43
WD repeat domain 43.
   
0.982
WDR75
WD repeat domain 75.
   
 0.981
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.