STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFAUncharacterized protein. (330 aa)    
Predicted Functional Partners:
METTL15
Methyltransferase like 15.
    
 
 0.848
MRPS21
28S ribosomal protein S21, mitochondrial.
   
   0.840
LOC105760103
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
   0.822
MRPS7
Mitochondrial ribosomal protein S7.
    
   0.822
MTIF3
Uncharacterized protein.
   
 
 0.806
TFB1M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.735
MRPS15
28S ribosomal protein S15, mitochondrial.
    
 
 0.713
DAP3
Death associated protein 3.
    
 
 0.708
MRPS23
MRP-S23 domain-containing protein.
   
   0.705
MRPS33
Uncharacterized protein.
   
   0.705
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.