STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAB2N-terminal EF-hand calcium binding protein 2. (386 aa)    
Predicted Functional Partners:
ENSTGUP00000032818
Muscle M-line assembly protein unc-89-like.
   
 0.579
PLPP4
acidPPc domain-containing protein.
    
 
 0.457
SV2B
Synaptic vesicle glycoprotein 2B.
    
 0.453
MGP
Matrix Gla protein.
      
 0.448
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.445
HTR1B
5-hydroxytryptamine receptor 1B.
   
 0.431
ZBTB20
Zinc finger and BTB domain containing 20.
    
 0.428
ARID4B
AT-rich interaction domain 4B.
   
 0.427
CRHR2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.426
GAD2
Glutamate decarboxylase 2.
    
 
 0.409
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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