STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV1ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (844 aa)    
Predicted Functional Partners:
TRPA1
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.826
TRPM8
Transient receptor potential cation channel subfamily M member 8.
   
 
 0.801
PIEZO2
Piezo-type mechanosensitive ion channel component.
      
 0.675
TRPM3
Transient receptor potential cation channel subfamily M member 3.
   
 
 0.670
ANK1
Ankyrin 1.
     
 0.616
CALM1
Calmodulin 2; Belongs to the calmodulin family.
    
 
 0.561
CALM1-2
Calmodulin like 3; Belongs to the calmodulin family.
    
 
 0.561
TRPM5
Transient receptor potential cation channel subfamily M member 5.
   
 
 0.524
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.520
H0ZHB8_TAEGU
ANK_REP_REGION domain-containing protein.
     
 0.489
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.