STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMS2LIM domain-containing protein. (339 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.966
RSU1
Ras suppressor protein 1.
   
 0.962
PARVA
Parvin alpha.
   
 0.831
PARVB
Parvin beta.
   
 0.831
PARVG
Parvin gamma.
  
 0.825
NCK2
NCK adaptor protein 2.
    
 
 0.781
PIDD1
P53-induced death domain protein 1.
    
 0.675
TMEM203
Transmembrane protein 203.
   
 0.641
ENSTGUP00000020175
annotation not available
   
 0.641
HEY2
Hes related family bHLH transcription factor with YRPW motif 2.
 
      0.585
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.