STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC14L1SEC14 like lipid binding 1. (715 aa)    
Predicted Functional Partners:
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
    
 
 0.630
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.598
SUMF1
Sulfatase modifying factor 1.
    
  0.577
KLHL21
Kelch like family member 21.
      
 0.555
PLD1
Phospholipase.
   
 
 0.526
METTL23
Methyltransferase like 23.
      
 0.501
MFSD11
Major facilitator superfamily domain containing 11.
      
 0.501
AP1G1
AP-1 complex subunit gamma.
    
 0.444
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.427
DENND3
UDENN domain-containing protein.
      
 0.424
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.