STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (322 aa)    
Predicted Functional Partners:
STIP1
Stress induced phosphoprotein 1.
    
   0.628
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.574
MEGF11
Multiple EGF like domains 11.
      
 0.566
SLC16A4
Solute carrier family 16 member 4.
      
 0.555
CHEK2
Checkpoint kinase 2.
      
 0.551
TMEM156
Transmembrane protein 156.
  
     0.518
IL10RA
Interleukin 10 receptor subunit alpha.
  
     0.431
AP4E1
AP4E_app_platf domain-containing protein.
      
 0.431
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.431
ARID4B
AT-rich interaction domain 4B.
      
 0.428
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.