STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (841 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.972
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.963
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1/A3.
   
 0.939
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.939
RBMX
RRM domain-containing protein.
   
 0.930
SRSF1
RRM domain-containing protein.
   
 0.713
YBX1
Y-box binding protein 1.
   
 0.688
SYNCRIP
Heterogeneous nuclear ribonucleoprotein Q isoform X1.
   
 0.670
DHX9
Uncharacterized protein.
   
 0.614
POLR2F
Uncharacterized protein.
     
 0.570
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.