STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFB2MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (392 aa)    
Predicted Functional Partners:
POLRMT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.993
TFAM
Transcription factor A, mitochondrial.
    
 0.976
BYSL
Essential nuclear protein 1.
   
 
 0.972
LTV1
Uncharacterized protein.
   
   0.916
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
   0.909
RIOK2
RIO kinase 2.
   
 
 0.889
NOL6
Nucleolar protein 6.
   
   0.885
WDR3
WD repeat domain 3.
   
   0.884
LOC115490559
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.883
LOC100219036
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.883
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.