STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A6Uncharacterized protein. (727 aa)    
Predicted Functional Partners:
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
      
 0.571
SLC1A1
Amino acid transporter.
  
 
 0.557
CD36
Uncharacterized protein; Belongs to the CD36 family.
      
 0.546
RNF165
Ring finger protein 165.
      
 0.493
SLC30A4
Solute carrier family 30 member 4.
   
 0.482
SLC39A9
Solute carrier family 39 member 9.
    
 
 0.434
SLC30A5
Solute carrier family 30 member 5.
  
 0.432
SLC30A7
Solute carrier family 30 member 7.
  
 0.432
SLC30A6
Solute carrier family 30 member 6.
  
 0.432
SLC30A1
Solute carrier family 30 member 1.
  
 0.432
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.