STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR1H4Nuclear receptor subfamily 1 group H member 4. (473 aa)    
Predicted Functional Partners:
PPARGC1A
PPARG coactivator 1 alpha.
   
 0.893
NCOA2
Nuclear receptor coactivator.
    
 0.862
NCOA3
Nuclear receptor coactivator.
    
 0.862
RXRA
Retinoid X receptor alpha.
   
0.832
NCOR2
Nuclear receptor corepressor 2.
    
 0.828
NCOR1
Nuclear receptor corepressor 1.
    
 0.828
RXRG
Uncharacterized protein.
   
0.818
ENSTGUP00000029122
annotation not available
   
0.818
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
0.775
FABP6
Fatty acid binding protein 6.
   
 0.764
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.