STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX47DEAD-box helicase 47; Belongs to the DEAD box helicase family. (456 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
 0.996
ESF1
NUC153 domain-containing protein.
   
 
 0.984
ENSTGUP00000031805
annotation not available
   
 0.966
PDCD11
Uncharacterized protein.
   
 0.956
DDX52
Uncharacterized protein.
  
0.953
LOC115493052
Neuroguidin-like.
   
 0.940
ENSTGUP00000033433
annotation not available
   
 0.940
NOP14
NOP14 nucleolar protein.
   
 0.937
DDX49
DEAD-box helicase 49.
  
 
0.919
UTP14A
Uncharacterized protein.
   
 0.917
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.