STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPAVAMP associated protein A. (260 aa)    
Predicted Functional Partners:
STARD3
StAR related lipid transfer domain containing 3.
    
 
 0.902
OSBP
PH domain-containing protein.
    
 0.820
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.820
OSBPL1A
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.784
VAPB
Putative vesicle-associated membrane protein-associated protein B/C variant 3.
  
0.753
CERT1
Ceramide transporter 1.
    
 0.743
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
    
 0.711
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.694
STARD3NL
STARD3 N-terminal like.
    
 
 0.689
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.666
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.