STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS6HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (815 aa)    
Predicted Functional Partners:
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
   
 0.840
HPS5
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
    
 0.834
HPS4
Uncharacterized protein.
     
 0.774
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
     
 0.718
BLOC1S3
Uncharacterized protein.
      
 0.578
BLOC1S4
Biogenesis of lysosomal organelles complex 1 subunit 4.
      
 0.547
AP3D1
Adaptor related protein complex 3 subunit delta 1.
      
 0.535
SNAPIN
SNARE-associated protein Snapin.
     
 0.502
TECPR2
Uncharacterized protein.
    
 
 0.487
H0YWT8_TAEGU
Uncharacterized protein.
      
 0.482
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.