STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX6Neuronal pentraxin receptor. (407 aa)    
Predicted Functional Partners:
PHC1
Uncharacterized protein.
    
 0.869
RNF2
RING-type domain-containing protein.
    
 0.843
CBX8
Chromobox 8.
    
0.841
CBX4
Chromobox 4.
    
0.821
EED
Embryonic ectoderm development.
    
 0.786
RING1
Ring finger protein 1.
    
 0.765
PCGF3
Polycomb group ring finger 3.
    
 0.736
CBX2
Chromobox 2.
    
0.736
EZH1
Uncharacterized protein.
    
 0.735
PCGF6
RING-type domain-containing protein.
    
 0.730
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.