STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL3Synaptotagmin like 3. (617 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.653
RAB27A
RAB27A, member RAS oncogene family.
   
 
 0.638
RIMS2
Uncharacterized protein.
     
0.613
TMEM154
Transmembrane protein 154.
      
 0.567
DLGAP1
DLG associated protein 1.
      
 0.513
VPS37A
VPS37A subunit of ESCRT-I.
      
 0.511
TMEM38A
Transmembrane protein 38A.
   
  
 0.502
CASK
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.477
ITSN1
Intersectin 1.
     
 0.469
ITSN1-2
Intersectin 1.
     
 0.469
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.