Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASPSCR1 | FAF1 | ENSTGUP00000003711 | ENSTGUP00000008905 | ASPSCR1 tether for SLC2A4, UBX domain containing. | Fas associated factor 1. | 0.962 |
ASPSCR1 | SPATA5 | ENSTGUP00000003711 | ENSTGUP00000002095 | ASPSCR1 tether for SLC2A4, UBX domain containing. | Spermatogenesis associated 5. | 0.777 |
ASPSCR1 | SPATA5L1 | ENSTGUP00000003711 | ENSTGUP00000007561 | ASPSCR1 tether for SLC2A4, UBX domain containing. | Spermatogenesis associated 5 like 1. | 0.777 |
ASPSCR1 | UBXN10 | ENSTGUP00000003711 | ENSTGUP00000030383 | ASPSCR1 tether for SLC2A4, UBX domain containing. | UBX domain protein 10. | 0.962 |
ASPSCR1 | UBXN2B | ENSTGUP00000003711 | ENSTGUP00000011467 | ASPSCR1 tether for SLC2A4, UBX domain containing. | Uncharacterized protein. | 0.968 |
ASPSCR1 | UBXN7 | ENSTGUP00000003711 | ENSTGUP00000034389 | ASPSCR1 tether for SLC2A4, UBX domain containing. | UBX domain-containing protein 7. | 0.994 |
ASPSCR1 | VCP | ENSTGUP00000003711 | ENSTGUP00000001825 | ASPSCR1 tether for SLC2A4, UBX domain containing. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.961 |
ASPSCR1 | YOD1 | ENSTGUP00000003711 | ENSTGUP00000001097 | ASPSCR1 tether for SLC2A4, UBX domain containing. | YOD1 deubiquitinase. | 0.484 |
DERL1 | FAF1 | ENSTGUP00000037150 | ENSTGUP00000008905 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Fas associated factor 1. | 0.651 |
DERL1 | SPATA5 | ENSTGUP00000037150 | ENSTGUP00000002095 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Spermatogenesis associated 5. | 0.912 |
DERL1 | SPATA5L1 | ENSTGUP00000037150 | ENSTGUP00000007561 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Spermatogenesis associated 5 like 1. | 0.912 |
DERL1 | UBXN2B | ENSTGUP00000037150 | ENSTGUP00000011467 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Uncharacterized protein. | 0.869 |
DERL1 | VCP | ENSTGUP00000037150 | ENSTGUP00000001825 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.984 |
FAF1 | ASPSCR1 | ENSTGUP00000008905 | ENSTGUP00000003711 | Fas associated factor 1. | ASPSCR1 tether for SLC2A4, UBX domain containing. | 0.962 |
FAF1 | DERL1 | ENSTGUP00000008905 | ENSTGUP00000037150 | Fas associated factor 1. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.651 |
FAF1 | SPATA5 | ENSTGUP00000008905 | ENSTGUP00000002095 | Fas associated factor 1. | Spermatogenesis associated 5. | 0.830 |
FAF1 | SPATA5L1 | ENSTGUP00000008905 | ENSTGUP00000007561 | Fas associated factor 1. | Spermatogenesis associated 5 like 1. | 0.830 |
FAF1 | UBXN2B | ENSTGUP00000008905 | ENSTGUP00000011467 | Fas associated factor 1. | Uncharacterized protein. | 0.965 |
FAF1 | UBXN7 | ENSTGUP00000008905 | ENSTGUP00000034389 | Fas associated factor 1. | UBX domain-containing protein 7. | 0.975 |
FAF1 | VCP | ENSTGUP00000008905 | ENSTGUP00000001825 | Fas associated factor 1. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.995 |
page 1 of 4