Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2M | RBM43 | ENSTGUP00000004745 | ENSTGUP00000012354 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Uncharacterized protein. | 0.502 |
FAM117B | RBM43 | ENSTGUP00000010422 | ENSTGUP00000012354 | Family with sequence similarity 117 member B. | Uncharacterized protein. | 0.504 |
IQSEC3 | RBM43 | ENSTGUP00000026700 | ENSTGUP00000012354 | IQ motif and Sec7 domain 3. | Uncharacterized protein. | 0.538 |
KPNB1 | RBM43 | ENSTGUP00000003520 | ENSTGUP00000012354 | Karyopherin subunit beta 1. | Uncharacterized protein. | 0.491 |
LOC100221944 | RBM43 | ENSTGUP00000020651 | ENSTGUP00000012354 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.519 |
LOC100221944-2 | RBM43 | ENSTGUP00000022262 | ENSTGUP00000012354 | Uncharacterized LOC100221944. | Uncharacterized protein. | 0.519 |
LOC100221944-3 | RBM43 | ENSTGUP00000024262 | ENSTGUP00000012354 | Uncharacterized LOC100221944. | Uncharacterized protein. | 0.519 |
RBM43 | B2M | ENSTGUP00000012354 | ENSTGUP00000004745 | Uncharacterized protein. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.502 |
RBM43 | FAM117B | ENSTGUP00000012354 | ENSTGUP00000010422 | Uncharacterized protein. | Family with sequence similarity 117 member B. | 0.504 |
RBM43 | IQSEC3 | ENSTGUP00000012354 | ENSTGUP00000026700 | Uncharacterized protein. | IQ motif and Sec7 domain 3. | 0.538 |
RBM43 | KPNB1 | ENSTGUP00000012354 | ENSTGUP00000003520 | Uncharacterized protein. | Karyopherin subunit beta 1. | 0.491 |
RBM43 | LOC100221944 | ENSTGUP00000012354 | ENSTGUP00000020651 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.519 |
RBM43 | LOC100221944-2 | ENSTGUP00000012354 | ENSTGUP00000022262 | Uncharacterized protein. | Uncharacterized LOC100221944. | 0.519 |
RBM43 | LOC100221944-3 | ENSTGUP00000012354 | ENSTGUP00000024262 | Uncharacterized protein. | Uncharacterized LOC100221944. | 0.519 |
RBM43 | RPA2 | ENSTGUP00000012354 | ENSTGUP00000000889 | Uncharacterized protein. | Replication protein A2. | 0.502 |
RBM43 | SASS6 | ENSTGUP00000012354 | ENSTGUP00000005429 | Uncharacterized protein. | SAS-6 centriolar assembly protein. | 0.502 |
RBM43 | STN1 | ENSTGUP00000012354 | ENSTGUP00000010690 | Uncharacterized protein. | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | 0.502 |
RPA2 | RBM43 | ENSTGUP00000000889 | ENSTGUP00000012354 | Replication protein A2. | Uncharacterized protein. | 0.502 |
SASS6 | RBM43 | ENSTGUP00000005429 | ENSTGUP00000012354 | SAS-6 centriolar assembly protein. | Uncharacterized protein. | 0.502 |
STN1 | RBM43 | ENSTGUP00000010690 | ENSTGUP00000012354 | CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. | Uncharacterized protein. | 0.502 |