STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRUncharacterized protein. (823 aa)    
Predicted Functional Partners:
LUC7L3
Uncharacterized protein.
   
  
 0.983
PNN
Pinin, desmosome associated protein.
   
 
 0.876
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.786
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.760
MYSM1
Uncharacterized protein.
   
 0.746
NKTR
Natural killer cell triggering receptor.
  
  0.744
PBRM1
Uncharacterized protein.
    
 0.728
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.707
TTC14
Tetratricopeptide repeat domain 14.
   
   0.674
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.661
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.