STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE3Spectrin repeat containing nuclear envelope family member 3. (993 aa)    
Predicted Functional Partners:
ENSTGUP00000020077
annotation not available
 
    
 0.786
SUN1
SUN domain-containing protein.
    
 0.690
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.652
ENSTGUP00000028419
annotation not available
    
 
 0.482
SYNE2
KASH domain-containing protein.
     
0.450
GABRA6
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
 
 
 0.412
GABRG2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
 
 
 0.412
GABRA4
Gamma-aminobutyric acid type A receptor alpha4 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
 
 
 0.412
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
 
 
 0.412
GABRA3
Gamma-aminobutyric acid type A receptor alpha3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.412
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.