STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL48Ribosomal_S10 domain-containing protein. (212 aa)    
Predicted Functional Partners:
MRPL51
Uncharacterized protein.
   
 
 0.944
MRPL46
MRP-L46 domain-containing protein.
   
   0.942
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.942
MRPL13
Uncharacterized protein.
   
 
 0.936
MRPL30
Ribosomal_L30 domain-containing protein.
   
 
 0.920
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.913
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.913
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.909
MRPL39
Uncharacterized protein.
   
   0.899
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.898
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.