STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (282 aa)    
Predicted Functional Partners:
NOP53
Ribosome biogenesis protein NOP53-like.
   
    0.839
LTV1
Uncharacterized protein.
   
    0.769
BYSL
Essential nuclear protein 1.
   
  
 0.737
DDX52
Uncharacterized protein.
   
  
 0.686
NOL10
Nucleolar protein 10.
   
  
 0.662
UTP23
Uncharacterized protein.
   
    0.640
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.639
RRP1B
Ribosomal RNA processing 1B.
   
    0.635
ESF1
NUC153 domain-containing protein.
   
    0.615
WDR36
WD repeat domain 36.
   
   0.583
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.