STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORBS2Sorbin and SH3 domain containing 2. (1391 aa)    
Predicted Functional Partners:
VCL
Uncharacterized protein.
   
 0.791
VTA1
Vesicle trafficking 1.
    
   0.662
GCH1
GTP cyclohydrolase 1.
    
   0.662
PDLIM3
PDZ and LIM domain 3.
 
  
 0.558
PDLIM5
PDZ and LIM domain 5.
   
 0.495
LOC100225363
TLC domain-containing protein.
      
 0.476
CBLB
Cbl proto-oncogene B.
    
 0.474
CBL
Uncharacterized protein.
    
 0.474
GAK
Cyclin G associated kinase.
     
 0.460
TLN1
Talin 1.
   
 
 0.457
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.