STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP5Z1Adaptor related protein complex 5 subunit zeta 1. (889 aa)    
Predicted Functional Partners:
AP5S1
Adaptor related protein complex 5 subunit sigma 1.
    
 0.758
SPG11
SPG11 vesicle trafficking associated, spatacsin.
    
 
 0.702
ZFYVE26
Uncharacterized protein.
      
 0.664
AP5M1
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.636
AP4S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.600
AP4E1
AP4E_app_platf domain-containing protein.
     
 0.587
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
     
 0.586
SPG21
Uncharacterized protein.
      
 0.511
ODR4
Odr-4 GPCR localization factor homolog.
      
 0.482
SEC16A
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
      
 0.482
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.