STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105759737Ubiquitin-like domain-containing protein. (157 aa)    
Predicted Functional Partners:
MYSM1
Uncharacterized protein.
   
 0.967
ENSTGUP00000026589
annotation not available
 
     0.931
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.915
XPC
Uncharacterized protein.
   
 0.915
NGLY1
PAW domain-containing protein.
    
 0.912
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
  
  
 
0.907
PSMC1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.879
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.868
UBE2V1-2
Ubiquitin conjugating enzyme E2 V1.
   
 0.867
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.867
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.