STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100190649Taeniopygia guttata necdin-like 2-like (LOC100190649), mRNA. (534 aa)    
Predicted Functional Partners:
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.969
NSMCE1
RING-type domain-containing protein.
   
 0.965
SMC5
AAA_15 domain-containing protein.
   
 0.964
SMC6
Structural maintenance of chromosomes 6.
   
 0.964
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.963
SMC3
Structural maintenance of chromosomes protein.
    
 0.716
ENSTGUP00000019482
annotation not available
    
 0.665
SMC1B
Structural maintenance of chromosomes protein.
   
 0.607
SMC1A
Structural maintenance of chromosomes protein 1A isoform X1.
   
 0.607
SMC4
Structural maintenance of chromosomes protein.
    
 0.589
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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