STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTGUP00000020567annotation not available (104 aa)    
Predicted Functional Partners:
ENSTGUP00000027954
annotation not available
  
  0.513
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.485
ARG2
Arginase.
    
 
 0.481
ENSTGUP00000034309
annotation not available
  
  0.476
MAPT
Microtubule associated protein tau.
    
   0.470
MAP2
Microtubule-associated protein.
    
   0.470
CD81
Tetraspanin.
    
  0.466
ENSTGUP00000028632
annotation not available
  
  0.463
ENSTGUP00000035738
annotation not available
  
 0.458
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.441
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.