STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICA1Islet cell autoantigen 1. (496 aa)    
Predicted Functional Partners:
PICK1
Uncharacterized protein.
    
 
 0.715
RAB2A
RAB2A, member RAS oncogene family.
    
 
 0.668
PKP2
Uncharacterized protein.
      
 0.554
CCDC186
Coiled-coil domain containing 186.
      
 0.545
PLA2G6
Phospholipase A2 group VI.
 
      0.536
RUNDC1
RUN domain containing 1.
    
 
 0.513
FAM117B
Family with sequence similarity 117 member B.
      
 0.513
DYM
Uncharacterized protein.
      
 0.505
DNAJC27
DnaJ heat shock protein family (Hsp40) member C27.
    
 
 0.494
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.487
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.