STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRQProtein tyrosine phosphatase receptor type Q. (2358 aa)    
Predicted Functional Partners:
ENSTGUP00000032818
Muscle M-line assembly protein unc-89-like.
   
 0.579
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.543
OTOGL
Otogelin like.
 
 
 0.537
MANF
Mesencephalic astrocyte derived neurotrophic factor.
     
 0.497
E2F7
E2F transcription factor 7.
      
 0.489
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.483
TMTC4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 0.419
USP31
Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.
   
 
 0.409
ENSTGUP00000038447
annotation not available
 
  
  0.406
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.