STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLMHBleomycin hydrolase; Belongs to the peptidase C1 family. (462 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 
 0.681
SH3BGRL
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
      
 0.677
CLPB
Uncharacterized protein.
      
 0.594
TPP2
Tripeptidyl peptidase 2.
   
 
 0.550
LNPEP
Uncharacterized protein.
    
 0.546
EDF1
HTH cro/C1-type domain-containing protein.
      
 0.522
GCH1
GTP cyclohydrolase 1.
      
 0.520
TTC19
Tetratricopeptide repeat domain 19.
      
 0.505
TMIGD1
Transmembrane and immunoglobulin domain containing 1.
 
      0.498
MTHFR
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
      
 0.491
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.