STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PXN-2Paxillin isoform X1. (233 aa)    
Predicted Functional Partners:
VCL
Uncharacterized protein.
   
 0.989
PARVA
Parvin alpha.
   
 0.973
PARVB
Parvin beta.
   
 0.973
CRK
Uncharacterized protein.
    
 0.973
CRKL
Uncharacterized protein.
    
 0.966
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.965
PTK2
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.965
GIT1
G protein-coupled receptor kinase interactor 1.
    
 0.963
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.958
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.957
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.