STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A1Amino acid transporter. (537 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 
 0.617
SLC38A2
Solute carrier family 38 member 2.
    
 
 0.612
ARL6IP5
PRA1 family protein.
    
 
 0.590
SLC39A6
Uncharacterized protein.
  
 
 0.557
SLC38A4
Solute carrier family 38 member 4.
    
 
 0.552
SLC7A5
Solute carrier family 7 member 5.
  
  
 0.552
SLC15A1
Solute carrier family 15 member 1.
   
 
 0.548
SLC7A1
AA_permease_C domain-containing protein.
     
 0.522
CLTRN
Collectrin domain-containing protein.
      
 0.503
H0ZSC5_TAEGU
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.498
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.