STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridine synthase 7. (651 aa)    
Predicted Functional Partners:
RPUSD2
RNA pseudouridine synthase domain containing 2.
    
 
 0.833
RPUSD3
RNA pseudouridine synthase D3.
    
 
 0.830
NOC3L
Nucleolar complex protein 3 homolog.
   
   0.820
PUS3
PseudoU_synth_1 domain-containing protein.
   
 
 0.792
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.783
UTP4
UTP4 small subunit processome component.
   
    0.759
MRPL15
Ribosomal_L18e/L15P domain-containing protein.
   
   0.742
DKC1
Dyskerin pseudouridine synthase 1.
   
  
 0.739
MRM3
SpoU_sub_bind domain-containing protein.
   
   0.729
MRPL13
Uncharacterized protein.
   
   0.729
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.