STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL22F-box and leucine rich repeat protein 22. (223 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.788
RBX1
Ring-box 1.
    
 0.610
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.600
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.544
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.527
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.502
NEDD8
NEDD8.
    
 0.449
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 
 0.421
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.411
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.