STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH7Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins. (785 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.772
JUP
Junction plakoglobin.
    
 0.771
HTT
Uncharacterized protein.
    
 
 0.678
FOXP2
Fork-head domain-containing protein.
      
 0.677
CTNND1
Uncharacterized protein.
    
 0.630
ARVCF
Uncharacterized protein.
    
 0.630
CTNNA2
Catenin alpha 2.
    
 0.607
CTNNA1
Catenin alpha 1.
    
 0.607
CTNNA3
Uncharacterized protein.
    
 0.607
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
    
0.550
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.